In summary,
I find the study's conclusions a bit flawed. There is no adequate prove of the southern origin of O. This is because their findings do not explicitly support thier conclusions. Their conclusion is that M-122 has highest SNP variance and STR diversity in Austroasiatic and Tai-Kadai speakers. And yet
the results show that the highest frequencies and SNP variances are actually among Tibeto-Burman speakers (who the study acknowledges are historically living in NW China) and the highest STR diversity are actually among southern Chinese (who is anyone below the Yangtze), not "SE Asian" (southern Chinese tribal groups). This discrepancy is unsatisfactrily explained away, which gives the impression that the authors are in favor of a particular theory instead of just presenting the data/results of their study and providing a series of alternative explanations.
The explaination isn't satisfactory because
1. It disagrees with histroy and archaeology.
2. Usually good authors/studies provide a series of alternatives to explain the data to give a balance and since of likelihood of each, whereas in this study only one theory is provided by the authors when several theories are present.
In conclusion, the authors are fitting the data into their own prefered box, without the data naturally fitting the box at all. Thus, the results may be unsatisfactory.
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Layout:
1. Frequency analysis, since the frequency map is probably what everyone looks at first, or even only.
2. SNP and STR diversity analysis.
3. Analysis of study's age estimate for M-122/O3.
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1. Frequency Analysis:
The highest frequencies are in SW China among particular Tibetan-Burman tribes, with the Dulong having 28 out of 28. The study itself acknowledges that Tibeto-Burman speakers are of a recent northern origin.

Frequency distribution cannot be used to deduce origin of O3 for two reasons:
a. Since the samples involving the groups with high frequency are relatively small and the frequency between different ethnic groups of the same region vary drastically, the high frequency in the SW China tribal areas can be best explained as founder effects in patrilineal tribal clans.
b. The northern origin of Tibeto-Burman groups:
From present study:
QUOTE
The Yangtze River was used as the geographic border to separate the SEAS and NEAS. In the SEAS, there are 14 Tibeto-Burman–speaking populations with a recorded history of migration from northern China ∼3,000 years ago (Wang 1994).
p. 3
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SNP and STR diversity
QUOTE
In general, the distribution of the O3-M122 haplotypes
did not show distinctive divergence between
southern and northern populations, with all the major
subhaplogroups shared between them—except for O3-
M7, which was observed only in the southern populations
and therefore indicates a recent common ancestry
of the O3-M122 lineage in East Asia. Using the STR
data, we calculated the gene diversities; no significant
differences were observed between SEAS and NEAS or
among different language groups (data not shown). The
AMOVA analysis did not show significant between-group
divergence either (data not shown).
However,
QUOTE
However, the MDS
analysis showed that the NEAS are closely related by
clustering together, whereas the SEAS showed relatively
loose connections with larger variance, indicating that
SEAS are genetically more polymorphic than are NEAS
(fig. 5). It should be noted that the difference in genetic
variance between NEAS and SEAS could be due to the
sampling-density discrepancy. However, our previous
studies showed that northern Han populations are relatively
homogenous, with similar Y-chromosome haplotype
distributions (Ke et al. 2001a, 2001b). In addition,
the four northern Han populations sampled in the present
study covered different geographic regions in northern
China. Therefore, the genetic variance observed probably
reflected the true genetic background of the northern
populations in China. In the MDS map, the Hmong-
Mien populations were clustered closely with Han populations,
which reflects the recorded history of admixture
(Wang 1994).
The conclusion here presumes that population homogeneity and heterogeity is unaffected by historical demographic changes, which is flawed. An analagous situation to elucidate this point is the distribution of 20 or so Chinese languages, of which only 1, Mandarin, is found in northern China. Furthermore, the southern Chinese languages preserve more of the ancient characteristics. A straight-forward conclusion would be that Chinese language originated in SE China, and yet this is contrary to history. The Chinese language and civilization orignated in the north. The drastic change and homogenity can best be explained by the extreme depopulation and cross-migrations in the north as a result of drought, civil wars, barbarian invasion - slaughter and drought and migration that is recorded in history.
The high variance between groups of Chinese languages in the south can best be explained by isolation in stable settings as well as successive waves of north immigrants. Similarly, the historical records also support this same cause for the same type of diversity among minority ethnic groups - successive waves pushed south under Han expansion and subsequent isolation under stable settings.
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From STR network, it seems that the green (southern Chinese and Tibeto-Burman) populations are where the highest diversity, major nodes, and ancestral motifs lay.


Authors further reduced groups to build a second network consisting of northern Chinese and A-A and TK speakers under the assumption that Hmong-Mien, Tibeto-Burman, and southern Chinese suffer from admixture, although it's unclear why T-K and A-A wouldn't also be under the same influence from Hmong-Mien/Miao-Yao and Tibeto-Burman since they live in the same region, often in the next village, and admixture is usually bi-directional.

Problems with rebuilt network:
1. Once you've taken away nodes, it's no longer the real deal with an interpreted network.
2. It's unclear how admixture affects the nodes themselves, which gives a straight-forward idea of where the nodes are located. We can assume that it was a case of Austroasiatics and Tai-Kadai migrating to southern China and becoming southern Chinese, but that's too many assumptions on too little evidence, and it also contradicts circumstancial historical of the southern migration of Tai-Kadai and even Austro-Asiatic. We can also assume that southern China was the original homeland of AA and TK, but that still doesn't support origin of O3 in SE Asia, as southern China is anywhere below the Yangtze. The origination point of rice cultivation in southern China is already a bit more like central China.
3. This interpreted network is based on presumptions that may be flawed.
4. It also leaves out an alternative scenario, that M122 arose in southern Chinese/Hmong-Mien/Tibeto-Burmans. This scenario actually agrees with the archaeology of agricultural spread and initiation in central China.
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2. Accuracy of study's age analysis of O3:
The estimated aged of lineages vary by study depending on method, assumed factors, and available data. O3 was estimated to be ~20-10,000 from another paper.
The age of O3 in present study, 20-30,000 years old, seems rather unlikely. If O3 is indeed that old SW China, which strattles the border with Assam in India, it would have shown up in Assam relatively early. Yet, O3 in India is associated with Tibeto-Burman speakers only, not Austro-Asiatic, and the time of entry is estimated to be relatively recent.

QUOTE
On the basis of the STR data, we estimated the ages
of the major O3-M122 subhaplogroups by use of the
coalescence method developed by Zhivotovsky (2001).
Table 3 lists the age estimations; all the subhaplogroups
have a history older than the Neolithic time, with a range
of 25,000–30,000 years ago.
P. 417 (p. 10 of PDF)

QUOTE(ocean view incubus @ Mar 5 2006, 09:17 PM) [snapback]4793468[/snapback]
This reminds me of FEMA's 9/11 report.
What's a FEMA blunder is how you used a sampe of 28 Dulong Tibeto-Burman tribals in SW China to argue with Asian teens for half a year on AF and other places about how "progressive Asians are mixed with "proto-Europids".
Another laughable thing is how you copied stuff my from blog and forum and then posted it here, proceeding to lecture to me about what an expert you are and how you are going to teach me the "real stuff". Then you got a lesson in reality by the members here, afterwhich you deleted all of your silly posts.
Every post you write just makes you look bad, though you don't know it. And it's sad considering your age that you don't realize that.